Skip to main content
Ctrl+K
nemos 0.2.9 documentation - Home nemos 0.2.9 documentation - Home
  • Install
  • Quickstart
  • Background
  • How-To Guide
  • Tutorials
  • API Reference
    • Getting Help
    • Citation Guide
    • For Developers
  • GitHub
  • X
  • Install
  • Quickstart
  • Background
  • How-To Guide
  • Tutorials
  • API Reference
  • Getting Help
  • Citation Guide
  • For Developers
  • GitHub
  • X
  • Tutorials

Tutorials#

A gallery of fully worked out tutorials analyzing neural recordings from different brain regions and recording modalities.

Additional requirements

To run the tutorials, you may need to install some additional packages used for plotting and data fetching. You can install all of the required packages with the following command:

pip install nemos[examples]
Current Injection.
  • Fit injected current
    • Learning objectives
    • Data Streaming
    • Pynapple
    • NeMoS
    • Citation
    • References
Head direction.
  • Fit head-direction population
    • Learning objectives
    • Data Streaming
    • Pynapple
    • NeMoS
Grid Cells.
  • Fit grid cell
    • Data Streaming
    • Pynapple
    • NeMoS
V1 cells.
  • Fit V1 cell
    • Data Streaming
    • Pynapple
    • Spike-triggered average
    • Preparing data for NeMoS
    • Fitting the GLM
Place cells.
  • Fit place cell
    • Data Streaming
    • Pynapple
    • Place fields
    • Phase precession
    • Speed modulation
    • Basis evaluation
    • Model learning
    • Prediction
    • Model selection
    • Conclusion
Calcium immaging.
  • Fit Calcium Imaging
    • Data Streaming
    • pynapple preprocessing
    • Basis instantiation
    • Gamma GLM
    • Design matrix
    • Train & test set
    • Model fitting
    • Model comparison
    • References

previous

Creating custom solvers for use with NeMoS

next

Fit injected current

Show Source

© Copyright 2024, nemos authors.
Created using Sphinx and the PyData Theme.

v0.2.9